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| Packages that use DataSourceException | |
| uk.ac.ebi.intact.application.editor.business | The classes implementing the business logic of the CvEdit application are in this package. |
| uk.ac.ebi.intact.application.graph2MIF | The classes of the Graph2MIF application are in this package. |
| uk.ac.ebi.intact.application.graph2MIF.client | This package contains the example clients of graph2MIF. You should easiely be able to copy the important lines for creating imports methods to you local application. |
| uk.ac.ebi.intact.application.hierarchView.business | Some utility classes and packages. |
| uk.ac.ebi.intact.application.predict.business | |
| uk.ac.ebi.intact.application.search2.business | |
| uk.ac.ebi.intact.persistence | This package provides a persistence capability for intact. |
| Uses of DataSourceException in uk.ac.ebi.intact.application.editor.business |
| Constructors in uk.ac.ebi.intact.application.editor.business that throw DataSourceException | |
EditUser(java.lang.String mapping,
java.lang.String dsClass,
java.lang.String user,
java.lang.String password)
Constructs an instance of this class with given mapping file and the name of the data source class. |
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EditUser(java.lang.String mapping,
java.lang.String dsClass)
This constructor for Seralization test class. |
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| Uses of DataSourceException in uk.ac.ebi.intact.application.graph2MIF |
| Methods in uk.ac.ebi.intact.application.graph2MIF that throw DataSourceException | |
java.lang.String |
Graph2MIFWSService.getMIF(java.lang.String ac,
java.lang.Integer depth,
java.lang.Boolean strictmif)
getMIF is the only method which is necessary for access. |
java.lang.String |
Graph2MIFWS.getMIF(java.lang.String ac,
java.lang.Integer depth,
java.lang.Boolean strictmif)
getMIF is the only method which is necessary. |
| Uses of DataSourceException in uk.ac.ebi.intact.application.graph2MIF.client |
| Constructors in uk.ac.ebi.intact.application.graph2MIF.client that throw DataSourceException | |
Graph2MIFConsole()
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| Uses of DataSourceException in uk.ac.ebi.intact.application.hierarchView.business |
| Constructors in uk.ac.ebi.intact.application.hierarchView.business that throw DataSourceException | |
IntactUser(java.lang.String applicationPath)
Constructs an instance of this class with given mapping file and the name of the data source class. |
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| Uses of DataSourceException in uk.ac.ebi.intact.application.predict.business |
| Methods in uk.ac.ebi.intact.application.predict.business that throw DataSourceException | |
static PredictUser |
PredictUser.create(java.lang.String mapping,
java.lang.String dsClass)
Factory method to create different instances of Predict user instances depending on the JDBC subprotocol. |
| Uses of DataSourceException in uk.ac.ebi.intact.application.search2.business |
| Constructors in uk.ac.ebi.intact.application.search2.business that throw DataSourceException | |
IntactUserImpl(java.lang.String mapping,
java.lang.String dsClass)
Constructs an instance of this class with given mapping file and the name of the data source class. |
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| Uses of DataSourceException in uk.ac.ebi.intact.persistence |
| Methods in uk.ac.ebi.intact.persistence that throw DataSourceException | |
void |
ObjectBridgeDAOSource.setConfig(java.util.Map configFiles)
This method sets up the configuration of ObjectBridge, based on the content of the configuration file whose name is passed in as a parameter. |
DAO |
ObjectBridgeDAOSource.getDAO()
This method returns a connection to the data source, ie in this case a broker instance which provides database connection. |
DAO |
ObjectBridgeDAOSource.getDAO(java.lang.String user,
java.lang.String password)
Returns a connection to the data source, and connects to it using the supplied username and password. |
void |
ObjectBridgeDAO.close()
closes a DAO (connection). |
void |
ObjectBridgeDAO.open()
opens a DAO (connection). |
static DAOSource |
DAOFactory.getDAOSource(java.lang.String sourceType)
This method returns a specific data source instance |
void |
DAOSource.setConfig(java.util.Map configFiles)
sets the configuration data for the data source. |
DAO |
DAOSource.getDAO()
This method returns a connection to the data source. |
DAO |
DAOSource.getDAO(java.lang.String user,
java.lang.String password)
Returns a connection made using the specified user details. |
void |
DAO.close()
closes a DAO (connection). |
void |
DAO.open()
opens a DAO (connection). |
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