uk.ac.ebi.intact.util
Class DagNode

java.lang.Object
  |
  +--uk.ac.ebi.intact.util.DagNode

public class DagNode

extends java.lang.Object

Auxiliary class to insert GO Dag nodes from a GO dag formatted flat file.

Method Summary

static DagNode	addNodes(java.io.BufferedReader in, DagNode aParent, java.lang.Class aTargetClass, IntactHelper helper, java.lang.String goidDatabase, int count) Read new nodes from the input, add nodes to the aParent node.
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Method Detail

addNodes

public static DagNode addNodes(java.io.BufferedReader in,
                               DagNode aParent,
                               java.lang.Class aTargetClass,
                               IntactHelper helper,
                               java.lang.String goidDatabase,
                               int count)
                        throws java.io.IOException,
                               org.apache.regexp.RESyntaxException,
                               java.lang.Exception

Read new nodes from the input, add nodes to the aParent node.

Parameters:

in - Go Dag format input source

aParent - The node to which new nodes will be added.

Throws:

java.io.IOException

org.apache.regexp.RESyntaxException

java.lang.Exception

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object