uk.ac.ebi.intact.application.editor.struts.view.biosrc
Class BioSourceViewBean

java.lang.Object
  |
  +--uk.ac.ebi.intact.application.editor.struts.framework.util.AbstractEditViewBean
        |
        +--uk.ac.ebi.intact.application.editor.struts.view.biosrc.BioSourceViewBean

All Implemented Interfaces:

java.io.Serializable

public class BioSourceViewBean

extends AbstractEditViewBean

BioSource edit view bean.

Version:

$Id: BioSourceViewBean.java,v 1.14 2004/03/24 11:36:02 smudali Exp $

Author:

Sugath Mudali (smudali@ebi.ac.uk)

See Also:

Serialized Form

Constructor Summary

BioSourceViewBean()

Method Summary

java.lang.String	getCellType()
java.util.List	getCellTypeMenu() The cell type menu list.
java.lang.String	getHelpTag() Returns the help tag link for the current view bean; subclasses must override this method to return the help tag (if necessary) or else the link to the CV editor is returned.
java.lang.String	getTaxId()
java.lang.String	getTissue()
java.util.List	getTissueMenu() The tissue menu list.
protected void	reset(AnnotatedObject annobj) Resets with the bean using an existing Annotated object.
protected void	reset(java.lang.Class clazz) Resets the bean with the current edit class.
void	setCellType(java.lang.String cellType)
void	setLayout(org.apache.struts.tiles.ComponentContext context) Sets the layout in given context.
void	setTaxId(java.lang.String taxid)
void	setTissue(java.lang.String tissue)
protected void	updateAnnotatedObject(EditUserI user) Gathers values in the view bean and updates the existing AnnotatedObject if it exists or create a new annotated object for the view and sets the annotated object.
void	updateFromForm(org.apache.struts.action.DynaActionForm dynaform) Updates the internal data from given form.

Methods inherited from class uk.ac.ebi.intact.application.editor.struts.framework.util.AbstractEditViewBean

addAnnotation, addToRecentList, addXref, clear, clearTransactions, delAnnotation, delXref, equals, getAc, getAcLink, getAddDatabaseMenu, getAddTopicMenu, getAddXrefMenus, getAnnotatedObject, getAnnotations, getDefaultXrefQualifier, getEditClass, getEditDatabaseMenu, getEditorMenus, getEditTopicMenu, getEditXrefMenus, getFullName, getMenuFactory, getReadOnly, getShortLabel, getXrefs, persist, persistOthers, removeFromRecentList, reset, sanityCheck, saveComment, saveXref, setAnnotatedObject, setFullName, setMenuFactory, setShortLabel, validate

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BioSourceViewBean

public BioSourceViewBean()

Method Detail

reset

protected void reset(java.lang.Class clazz)

Description copied from class: AbstractEditViewBean

Resets the bean with the current edit class. This method is called when creating a new annotated object (only the class or the type is known at that time).

Overrides:

reset in class AbstractEditViewBean

Parameters:

clazz - the Class of the new annotated object.

reset

protected void reset(AnnotatedObject annobj)

Description copied from class: AbstractEditViewBean

Resets with the bean using an existing Annotated object.

Overrides:

reset in class AbstractEditViewBean

Parameters:

annobj - AnnotatedObject object to set this bean.

updateAnnotatedObject

protected void updateAnnotatedObject(EditUserI user)
                              throws SearchException

Description copied from class: AbstractEditViewBean

Gathers values in the view bean and updates the existing AnnotatedObject if it exists or create a new annotated object for the view and sets the annotated object.

Specified by:

updateAnnotatedObject in class AbstractEditViewBean

Parameters:

user - to access the persistent system.

Throws:

SearchException - for errors in searching the persistent system.

 post: getAnnotatedObject() != null
 

updateFromForm

public void updateFromForm(org.apache.struts.action.DynaActionForm dynaform)

Description copied from class: AbstractEditViewBean

Updates the internal data from given form.

Overrides:

updateFromForm in class AbstractEditViewBean

Parameters:

dynaform - the form to update the internal data.

setLayout

public void setLayout(org.apache.struts.tiles.ComponentContext context)

Description copied from class: AbstractEditViewBean

Sets the layout in given context. This method is currently empty as the layout defaults to cv layout. Override this method to provide editor specific layout.

Overrides:

setLayout in class AbstractEditViewBean

Parameters:

context - the Tiles context to set the layout.

getHelpTag

public java.lang.String getHelpTag()

Description copied from class: AbstractEditViewBean

Returns the help tag link for the current view bean; subclasses must override this method to return the help tag (if necessary) or else the link to the CV editor is returned.

Overrides:

getHelpTag in class AbstractEditViewBean

Returns:

the tag as a String for the current view bean.

getTaxId

public java.lang.String getTaxId()

setTaxId

public void setTaxId(java.lang.String taxid)

getCellType

public java.lang.String getCellType()

setCellType

public void setCellType(java.lang.String cellType)

getTissue

public java.lang.String getTissue()

setTissue

public void setTissue(java.lang.String tissue)

getCellTypeMenu

public java.util.List getCellTypeMenu()
                               throws SearchException

The cell type menu list.

Returns:

the cell type menu consisting of CvCellType short labels. The first item in the menu contains the '---Select---' item.

Throws:

SearchException - for errors in generating menus.

getTissueMenu

public java.util.List getTissueMenu()
                             throws SearchException

The tissue menu list.

Returns:

the tissue menu consisting of CvTissue short labels. The first item in the menu contains the '---Select---' item.

Throws:

SearchException - for errors in generating menus.