uk.ac.ebi.intact.model
Interface AnnotatedObject

All Superinterfaces:

BasicObject, IntactObject

All Known Subinterfaces:

Interaction, Interactor, Protein

All Known Implementing Classes:

AnnotatedObjectImpl, AnnotatedObjectProxy, InteractionImpl, InteractionProxy, InteractorImpl, InteractorProxy, ProteinImpl, ProteinProxy

public interface AnnotatedObject

extends BasicObject

Version:

$Id: AnnotatedObject.java,v 1.16 2004/01/31 11:31:00 skerrien Exp $

Author:

Samuel Kerrien (skerrien@ebi.ac.uk)

See Also:

AnnotatedObjectImpl

Method Summary

void	addAlias(Alias alias)
void	addAnnotation(Annotation annotation)
void	addReference(Reference reference)
void	addXref(Xref aXref)
boolean	equals(java.lang.Object o)
java.util.Collection	getAliases()
java.util.Collection	getAnnotations()
Person	getCurator()
java.lang.String	getCuratorAc()
java.lang.String	getFullName()
java.util.Collection	getReferences()
java.lang.String	getShortLabel()
java.util.Collection	getXrefs()
int	hashCode()
void	removeAlias(Alias alias)
void	removeAnnotation(Annotation annotation)
void	removeReference(Reference reference)
void	removeXref(Xref xref)
void	setAliases(java.util.Collection someAliases)
void	setAnnotation(java.util.Collection someAnnotation)
void	setCurator(Person person)
void	setCuratorAc(java.lang.String ac)
void	setFullName(java.lang.String fullName)
void	setReferences(java.util.Collection someReferences)
void	setShortLabel(java.lang.String shortLabel)
void	setXrefs(java.util.Collection someXrefs)
java.lang.String	toString()
AnnotatedObject	update(IntactHelper helper)
Annotation	updateUniqueAnnotation(CvTopic topic, java.lang.String description, Institution owner)

Methods inherited from interface uk.ac.ebi.intact.model.BasicObject

addEvidence, getEvidences, getOwner, getOwnerAc, removeEvidence, setEvidences, setOwner, setOwnerAc

Methods inherited from interface uk.ac.ebi.intact.model.IntactObject

getAc, getCreated, getUpdated, setAc, setCreated, setUpdated

Method Detail

getShortLabel

public java.lang.String getShortLabel()

setShortLabel

public void setShortLabel(java.lang.String shortLabel)

getFullName

public java.lang.String getFullName()

setFullName

public void setFullName(java.lang.String fullName)

setAnnotation

public void setAnnotation(java.util.Collection someAnnotation)

getAnnotations

public java.util.Collection getAnnotations()

addAnnotation

public void addAnnotation(Annotation annotation)

removeAnnotation

public void removeAnnotation(Annotation annotation)

getCurator

public Person getCurator()

setCurator

public void setCurator(Person person)

setXrefs

public void setXrefs(java.util.Collection someXrefs)

getXrefs

public java.util.Collection getXrefs()

addXref

public void addXref(Xref aXref)

removeXref

public void removeXref(Xref xref)

setAliases

public void setAliases(java.util.Collection someAliases)

getAliases

public java.util.Collection getAliases()

addAlias

public void addAlias(Alias alias)

removeAlias

public void removeAlias(Alias alias)

setReferences

public void setReferences(java.util.Collection someReferences)

getReferences

public java.util.Collection getReferences()

addReference

public void addReference(Reference reference)

removeReference

public void removeReference(Reference reference)

getCuratorAc

public java.lang.String getCuratorAc()

setCuratorAc

public void setCuratorAc(java.lang.String ac)

update

public AnnotatedObject update(IntactHelper helper)
                       throws IntactException

IntactException

updateUniqueAnnotation

public Annotation updateUniqueAnnotation(CvTopic topic,
                                         java.lang.String description,
                                         Institution owner)

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Specified by:

toString in interface BasicObject

Overrides:

toString in class java.lang.Object