Uses of Package
uk.ac.ebi.intact.persistence

Packages that use uk.ac.ebi.intact.persistence

uk.ac.ebi.intact.application.editor.business	The classes implementing the business logic of the CvEdit application are in this package.
uk.ac.ebi.intact.application.graph2MIF	The classes of the Graph2MIF application are in this package.
uk.ac.ebi.intact.application.graph2MIF.client	This package contains the example clients of graph2MIF. You should easiely be able to copy the important lines for creating imports methods to you local application.
uk.ac.ebi.intact.application.hierarchView.business	Some utility classes and packages.
uk.ac.ebi.intact.application.hierarchView.business.graph	Contains classes to specialize the generic Graph class, and so give a specific behaviour like TLP export.
uk.ac.ebi.intact.application.predict.business
uk.ac.ebi.intact.application.search2.business
uk.ac.ebi.intact.persistence	This package provides a persistence capability for intact.
uk.ac.ebi.intact.util	Various utilities and auxiliary scripts.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.editor.business

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.graph2MIF

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.graph2MIF.client

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.hierarchView.business

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.hierarchView.business.graph

SearchException
Exception class to provide more meaningful error messages.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.predict.business

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.application.search2.business

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.persistence

AbstractSequenceManager

CreateException
Exception class to provide more meaningful error messages.

DAO
This interface defines the methods available from a Data Access Object (DAO) implementation.

DAOSource
This interface defines the functionality usually provided by a specific data source, eg Castor, oracle etc.

DataSourceException
Custom exception class to handle errors occurring with eg opening/closing a connection to a data source.

SearchException
Exception class to provide more meaningful error messages.

TransactionException
Specific exception class for handling transaction errors that may be thrown from a DAO.

UpdateException
Exception class to provide more meaningful error messages.

Classes in uk.ac.ebi.intact.persistence used by uk.ac.ebi.intact.util

CreateException
Exception class to provide more meaningful error messages.

UpdateException
Exception class to provide more meaningful error messages.