uk.ac.ebi.intact.util.fileParsing.beans
Class GiotLineBean

java.lang.Object
  |
  +--uk.ac.ebi.intact.util.fileParsing.beans.GiotLineBean

public final class GiotLineBean

extends java.lang.Object

Version:

$Id: GiotLineBean.java,v 1.1 2003/12/19 16:32:13 skerrien Exp $

Author:

Samuel Kerrien (skerrien@ebi.ac.uk)

Field Summary

static int	BI_DIRECTIONAL_ORIENTATION
static int	MONO_DIRECTIONAL_ORIENTATION
static int	NO_ORIENTATION

Constructor Summary

GiotLineBean(java.lang.String line)

Method Summary

java.util.Collection	getAdditionalCg1()
java.util.Collection	getAdditionalCg2()
int	getBait3utr()
int	getBait5utr()
int	getBaitOther()
int	getBaitPrey()
java.lang.String	getCconf()
java.lang.String	getCg1()
java.lang.String	getCg2()
java.lang.String	getLine()
int	getNorient()
java.lang.String	getP1()
java.lang.String	getP2()
int	getPrey3utr()
int	getPrey5utr()
int	getPreyBait()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

NO_ORIENTATION

public static final int NO_ORIENTATION

See Also:

Constant Field Values

MONO_DIRECTIONAL_ORIENTATION

public static final int MONO_DIRECTIONAL_ORIENTATION

See Also:

Constant Field Values

BI_DIRECTIONAL_ORIENTATION

public static final int BI_DIRECTIONAL_ORIENTATION

See Also:

Constant Field Values

Constructor Detail

GiotLineBean

public GiotLineBean(java.lang.String line)

Method Detail

getLine

public java.lang.String getLine()

getCg1

public java.lang.String getCg1()

getAdditionalCg1

public java.util.Collection getAdditionalCg1()

getCg2

public java.lang.String getCg2()

getAdditionalCg2

public java.util.Collection getAdditionalCg2()

getP1

public java.lang.String getP1()

getP2

public java.lang.String getP2()

getNorient

public int getNorient()

getBaitPrey

public int getBaitPrey()

getPreyBait

public int getPreyBait()

getPrey5utr

public int getPrey5utr()

getPrey3utr

public int getPrey3utr()

getBait5utr

public int getBait5utr()

getBait3utr

public int getBait3utr()

getBaitOther

public int getBaitOther()

getCconf

public java.lang.String getCconf()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object